Sequence Similarity Clusters for the Entities in PDB 1HLV

Entity #1 | Chains: B
CENP-B BOX DNA dna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C
CENP-B BOX DNA dna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
MAJOR CENTROMERE AUTOANTIGEN B protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60173
95 % 1 1 49126
90 % 1 1 46631
70 % 1 1 40875
50 % 1 1 34683
40 % 1 1 30387
30 % 1 1 25380

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures