Sequence Similarity Clusters for the Entities in PDB 1HLV

Entity #1 | Chains: B
CENP-B BOX DNA dna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C
CENP-B BOX DNA dna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
MAJOR CENTROMERE AUTOANTIGEN B protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65501
95 % 1 1 45200
90 % 1 1 42894
70 % 1 1 37700
50 % 1 1 32115
40 % 1 1 28360
30 % 1 1 24039

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.