Sequence Similarity Clusters for the Entities in PDB 1HLV

Entity #1 | Chains: B
CENP-B BOX DNA dna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C
CENP-B BOX DNA dna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
MAJOR CENTROMERE AUTOANTIGEN B protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68522
95 % 1 1 47200
90 % 1 1 44704
70 % 1 1 39198
50 % 1 1 33342
40 % 1 1 29432
30 % 1 1 24940

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures