Sequence Similarity Clusters for the Entities in PDB 1HLU

Entity #1 | Chains: A
BETA-ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 17 783
95 % 90 193 9 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.0
PDBFlex
90 % 92 198 10
70 % 96 203 15
50 % 96 210 16
40 % 99 229 23
30 % 102 249 40
Entity #2 | Chains: P
PROFILIN protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 15994
95 % 4 5 14938 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 15 17 3051
70 % 15 17 3027
50 % 19 21 2092
40 % 19 21 2091
30 % 39 44 973

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures