Sequence Similarity Clusters for the Entities in PDB 1HLU

Entity #1 | Chains: A
BETA-ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 12052
95 % 90 205 9 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 0.9
PDBFlex
90 % 92 211 9
70 % 96 216 11
50 % 96 223 15
40 % 99 242 25
30 % 102 262 39
Entity #2 | Chains: P
PROFILIN protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 16414
95 % 4 5 15249 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 15 17 3130
70 % 15 17 3067
50 % 19 21 2161
40 % 19 21 2135
30 % 39 44 997

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures