Sequence Similarity Clusters for the Entities in PDB 1HLU

Entity #1 | Chains: A
BETA-ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 17 798
95 % 90 197 9 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.0
PDBFlex
90 % 92 203 10
70 % 96 208 13
50 % 96 215 15
40 % 99 234 24
30 % 102 254 42
Entity #2 | Chains: P
PROFILIN protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 16376
95 % 4 5 15258 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 15 17 3125
70 % 15 17 3089
50 % 19 21 2139
40 % 19 21 2140
30 % 39 44 996

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures