Sequence Similarity Clusters for the Entities in PDB 1HLT

Entity #1 | Chains: J,L
ALPHA-THROMBIN (SMALL SUBUNIT) protein, length: 27 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 298 335 45
95 % 299 336 60
90 % 299 336 65
70 % 300 338 76
50 % 300 338 101
40 % 300 338 125
30 % 300 338 137
Entity #2 | Chains: H,K
ALPHA-THROMBIN (LARGE SUBUNIT) protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 258 290 55
95 % 333 374 35
90 % 338 381 38
70 % 354 405 44
50 % 354 405 78
40 % 1503 1684 4
30 % 1623 1833 6
Entity #3 | Chains: R
Thrombomodulin protein, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.