Sequence Similarity Clusters for the Entities in PDB 1HLT

Entity #1 | Chains: J,L
ALPHA-THROMBIN (SMALL SUBUNIT) protein, length: 27 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 291 328 42
95 % 292 329 57
90 % 292 329 61
70 % 293 331 71
50 % 293 331 95
40 % 293 331 120
30 % 293 331 132
Entity #2 | Chains: H,K
ALPHA-THROMBIN (LARGE SUBUNIT) protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 251 283 51
95 % 326 367 33
90 % 331 374 35
70 % 347 398 40
50 % 347 398 70
40 % 1427 1605 4
30 % 1544 1747 6
Entity #3 | Chains: R
Thrombomodulin protein, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.