Sequence Similarity Clusters for the Entities in PDB 1HLA

Entity #1 | Chains: A
CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-A2) (ALPHA CHAIN) protein, length: 270 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 199 199 53
95 % 249 249 58 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 297 297 36
70 % 705 705 6
50 % 710 710 6
40 % 761 761 10
30 % 881 881 15
Entity #2 | Chains: M
BETA 2-MICROGLOBULIN protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 607 607 2
95 % 651 651 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 0.9
PDBFlex
90 % 660 660 4
70 % 898 898 4
50 % 920 920 3
40 % 920 920 8
30 % 920 920 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.