Sequence Similarity Clusters for the Entities in PDB 1HLA

Entity #1 | Chains: A
CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-A2) (ALPHA CHAIN) protein, length: 270 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 197 197 52
95 % 246 246 58 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 290 290 36
70 % 687 687 6
50 % 692 692 6
40 % 742 742 10
30 % 859 859 15
Entity #2 | Chains: M
BETA 2-MICROGLOBULIN protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 596 596 2
95 % 639 639 3
90 % 648 648 4
70 % 878 878 4
50 % 900 900 3
40 % 900 900 8
30 % 900 900 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.