Sequence Similarity Clusters for the Entities in PDB 1HKX

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L,M,N
CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE TYPE II ALPHA CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 4808
95 % 1 1 5125 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 1 1 5152
70 % 3 3 1769
50 % 4 6 1079
40 % 5 7 1078
30 % 5 7 1075

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures