Sequence Similarity Clusters for the Entities in PDB 1HKW

Entity #1 | Chains: A,B
DIAMINOPIMELATE DECARBOXYLASE protein, length: 453 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 17562
95 % 2 3 8409 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 2 3 8347
70 % 2 3 8029
50 % 2 3 7374
40 % 2 3 6852
30 % 14 15 1757

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures