Sequence Similarity Clusters for the Entities in PDB 1HKW

Entity #1 | Chains: A,B
DIAMINOPIMELATE DECARBOXYLASE protein, length: 453 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 23380
95 % 2 3 10117 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 2 3 9984
70 % 2 3 9483
50 % 4 5 5734
40 % 4 5 5347
30 % 16 17 1623

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures