Sequence Similarity Clusters for the Entities in PDB 1HKV

Entity #1 | Chains: A,B
DIAMINOPIMELATE DECARBOXYLASE protein, length: 453 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 17902
95 % 3 3 8547 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 3 3 8484
70 % 3 3 8157
50 % 5 5 5179
40 % 5 5 4891
30 % 17 17 1594

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures