Sequence Similarity Clusters for the Entities in PDB 1HKV

Entity #1 | Chains: A,B
DIAMINOPIMELATE DECARBOXYLASE protein, length: 453 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 23556
95 % 3 3 10192 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 3 3 10061
70 % 3 3 9554
50 % 5 5 5766
40 % 5 5 5379
30 % 17 17 1632

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures