Sequence Similarity Clusters for the Entities in PDB 1HKV

Entity #1 | Chains: A,B
DIAMINOPIMELATE DECARBOXYLASE protein, length: 453 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 16770
95 % 3 3 8031 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 3 3 7982
70 % 3 3 7663
50 % 3 3 7052
40 % 3 3 6560
30 % 15 15 1685

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.