Sequence Similarity Clusters for the Entities in PDB 1HKQ

Entity #1 | Chains: A,B
REPLICATION PROTEIN protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46136
95 % 1 1 34597 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 33040
70 % 1 1 29432
50 % 1 1 25100
40 % 1 1 22082
30 % 1 1 18685

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures