Sequence Similarity Clusters for the Entities in PDB 1HKN

Entity #1 | Chains: A,B,C,D,E,F
HEPARIN-BINDING GROWTH FACTOR 1 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 33 487
95 % 57 98 151 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 0.7
PDBFlex
90 % 58 101 152
70 % 58 102 175
50 % 83 142 170
40 % 84 143 182
30 % 85 144 201

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1RG8 1 A, B Heparin-binding growth factor 1 9606
2 3P6I 1 A de novo designed beta-trefoil architecture with symmetric primary structure
3 3P6J 1 A de novo designed beta-trefoil architecture with symmetric primary structure
4 3Q7X 1 A de novo designed beta-trefoil architecture with symmetric primary structure
5 4QBV 1 A, B Fibroblast growth factor 1 UNP residues 16-155 9606
6 2J3P 1 A, B HEPARIN-BINDING GROWTH FACTOR 1 RESIDUES 22-155 10116
7 4QC4 1 A, B Fibroblast growth factor 1 UNP residues 16-155 9606
8 4QAL 1 A, B Fibroblast growth factor 1 UNP residues 16-155 9606
9 3O4A 1 A, B, C, D de novo designed beta-trefoil architecture with symmetric primary structure 32630
10 4OEE 1 A Fibroblast growth factor 2 unp residues 134-288 9606
11 3Q7W 1 A de novo designed beta-trefoil architecture with symmetric primary structure
12 3Q7Y 1 A De novo designed beta-trefoil architecture with symmetric primary structure
13 3O49 1 A de novo designed beta-trefoil architecture with symmetric primary structure 32630
14 4QBC 1 A, B Fibroblast growth factor 1 UNP residues 16-155 9606
15 4Q9G 1 A, B Fibroblast growth factor 1 UNP residues 16-155 9606
16 1BFG 1 A BASIC FIBROBLAST GROWTH FACTOR 9606
17 3BB2 1 A, B Heparin-binding growth factor 1 9606
18 4FGF 1 A BASIC FIBROBLAST GROWTH FACTOR 9606
19 3B9U 1 A Heparin-binding growth factor 1 9606
20 3O3Q 1 A, B, C, D Heparin-binding growth factor 1 9606
21 3BAO 1 A, B Heparin-binding growth factor 1 9606
22 4OEG 1 A Fibroblast growth factor 2 unp residues 134-288 9606
23 2HWM 1 A, B Heparin-binding growth factor 1 9606
24 3BA7 1 A, B Heparin-binding growth factor 1 9606
25 3BAV 1 A, B Heparin-binding growth factor 1 9606
26 2HW9 1 A, B Heparin-binding growth factor 1 9606
27 3BAU 1 A, B Heparin-binding growth factor 1 9606
28 3BAH 1 A, B Heparin-binding growth factor 1 9606
29 3O4D 1 A de novo designed beta-trefoil architecture with symmetric primary structure 32630
30 1P63 1 A, B ACIDIC FIBROBLAST GROWTH FACTOR 140 Amino Acid Form with Amino Terminal His Tag 9606
31 4QKS 1 A DE NOVO PROTEIN 6XTRP/PV2 32630
32 2HZ9 1 A, B Heparin-binding growth factor 1 9606
33 4Q91 1 A, B Fibroblast growth factor 1 UNP residues 16-155 9606
34 4QKR 1 A DE NOVO PROTEIN 6XTYR/PV2 32630
35 4OEF 1 A Fibroblast growth factor 2 9606
36 4Q9P 1 A, B Fibroblast growth factor 1 UNP residues 16-155 9606
37 2Q9X 1 A Heparin-binding growth factor 1 9606
38 2FGF 1 A HEPARIN-BINDING GROWTH FACTOR 2 PRECURSOR 9606
39 3BAG 1 A, B Heparin-binding growth factor 1 9606
40 3BA5 1 A, B Heparin-binding growth factor 1 9606
41 3O4C 1 A de novo designed beta-trefoil architecture with symmetric primary structure 32630
42 3O4B 1 A de novo designed beta-trefoil architecture with symmetric primary structure 32630
43 2HWA 1 A, B Heparin-binding growth factor 1 9606
44 3HAL 1 A, B Fibroblast growth factor 1 isoform 1 9986
45 1Q04 1 A, B Heparin-binding growth factor 1 9606
46 1M16 1 A, B acidic fibroblast growth factor 9606
47 3BA4 1 A, B Heparin-binding growth factor 1 9606
48 3CQA 1 A, B Heparin-binding growth factor 1 UNP residues 16-152 9606
49 3BAQ 1 A, B Heparin-binding growth factor 1 9606
50 1IJT 1 A fibroblast growth factor 4 b-trefoil domain 9606
51 4D8H 1 A de novo protein F22L/F44L/F64L/F85L/F108L/F132L hisSymfoil-4P/PV1 (6xLeu PV1) de novo designed beta-trefoil architecture with symmetric primary structure enriched for pre-biotic amino acids 32630
52 3CRG 1 A, B Heparin-binding growth factor 1 9606
53 1BAS 1 A BASIC FIBROBLAST GROWTH FACTOR 9606
54 3FJH 1 A, B Heparin-binding growth factor 1 9606
55 4YOL 1 A, B Fibroblast growth factor 1 UNP residues 16-155 9606
56 2AQZ 1 A, B Heparin-binding growth factor 1 9606
57 3FJF 1 A, B Heparin-binding growth factor 1 9606
58 1Z2V 1 A, B Heparin-binding growth factor 1 9606
59 3FJ9 1 A, B Heparin-binding growth factor 1 9606
60 3FJJ 1 A, B Heparin-binding growth factor 1 9606
61 3FJD 1 A, B Heparin-binding growth factor 1 9606
62 2AFG 1 A, B, C, D ACIDIC FIBROBLAST GROWTH FACTOR 9606
63 4QO3 1 A, B Fibroblast growth factor 1 UNP residues 16-155 9606
64 3FJA 1 A, B Heparin-binding growth factor 1 9606
65 4XKI 1 A, B Fibroblast growth factor 1 9606
66 1BFB 1 A BASIC FIBROBLAST GROWTH FACTOR 9606
67 1NZK 1 A, B, C, D Acidic Fibroblast Growth Factor 9606
68 1FGA 1 A BASIC FIBROBLAST GROWTH FACTOR 9606
69 4F34 1 A, B, C, D de novo protein Symfoil-4V 32630
70 1BFF 1 A BASIC FIBROBLAST GROWTH FACTOR 9606
71 1PZZ 1 A, B Heparin-binding growth factor 1 9606
72 3FGM 1 A, B Heparin-binding growth factor 1 9606
73 3FJ8 1 A, B Heparin-binding growth factor 1 9606
74 3FJB 1 A, B Heparin-binding growth factor 1 9606
75 5X1O 1 A, B Fibroblast growth factor 2 9606
76 3FJC 1 A, B Heparin-binding growth factor 1 9606
77 1Q03 1 A, B Heparin-binding growth factor 1 9606
78 3BAD 1 A, B Heparin-binding growth factor 1 9606
79 3CRH 1 A, B Heparin-binding growth factor 1 9606
80 3FJE 1 A, B Heparin-binding growth factor 1 9606
81 1YTO 1 A, B, C, D Heparin-binding growth factor 1 9606
82 3CRI 1 A, B Heparin-binding growth factor 1 9606
83 3K1X 1 A, B, C, D, E, F Heparin-binding growth factor 1 Heparin-binding, UNP residues 24-153 9606
84 1HKN 1 A, B, C, D, E, F HEPARIN-BINDING GROWTH FACTOR 1 9606
85 1K5U 1 A, B, C Acidic fibroblast growth factor Amino Terminal HIS TAG 9606
86 1BFC 1 A BASIC FIBROBLAST GROWTH FACTOR 9606
87 3SNV 1 A, B Symfoil-4T/Permutation #1 synthetic protein 9606
88 3OJM 1 A Heparin-binding growth factor 1 9606
89 2UUS 1 A, B HEPARIN-BINDING GROWTH FACTOR 1 RESIDUES 22-153 10116
90 1K5V 1 A, B Acidic fibroblast growth factor AMINO TERMINAL HIS TAG 9606
91 3FJK 1 A, B, C, D Heparin-binding growth factor 1 9606
92 3HOM 1 A, B Acidic fibroblast growth factor 9606
93 4OW4 1 A, B Beta-terfoil designed by folding nucleus symmetric expansion ("Phifoil") 32630
94 2BFH 1 A BASIC FIBROBLAST GROWTH FACTOR 9606
95 3JUT 1 A, B, C, D, E, F Heparin-binding growth factor 1 Heparin-binding, UNP residues 24-153 9606
96 2NTD 1 A, B, C, D Acidic fibroblast growth factor 1 9606
97 3UD9 1 A, B, C Heparin-binding growth factor 1 9606
98 3UD8 1 A, B, C Heparin-binding growth factor 1 9606
99 1EV2 1 A, B, C, D PROTEIN (FIBROBLAST GROWTH FACTOR 2) THE B-TREFOIL CORE OF FIBROBLAST GROWTH FACTOR 2 9606
100 3CU1 2 B, D Heparin-binding growth factor 1 UNP residues 22-152 9606
101 1IIL 1 A, B, C, D HEPARIN-BINDING GROWTH FACTOR 2 9606
102 1BAR 1 A, B ACIDIC FIBROBLAST GROWTH FACTOR 9913
103 3OJ2 1 A, B Heparin-binding growth factor 1 9606
104 1DJS 2 B PROTEIN (FIBROBLAST GROWTH FACTOR 1) 9606
105 1Z4S 1 A, B, C, D Heparin-binding growth factor 1 9606
106 1QQL 1 A FIBROBLAST GROWTH FACTOR 7/1 CHIMERA DUAL-FUNCTION CHIMERA BETWEEN RAT FGF-7 ENCODED BY EXON 1 AND 2 AND HUMAN FGF-1 ENCODED BY EXON 3 10116 2.5.1.16 | Details
107 3UDA 1 A, B, C Heparin-binding growth factor 1 9606
108 3FJI 1 A, B, C, D Heparin-binding growth factor 1 9606
109 1AFC 1 A, B, C, D, E, F, G, H ACIDIC FIBROBLAST GROWTH FACTOR 9913
110 3UD7 1 A, B, C Heparin-binding growth factor 1 9606
111 3OJV 1 A, B Heparin-binding growth factor 1 9606
112 1II4 1 A, B, C, D HEPARIN-BINDING GROWTH FACTOR 2 9606
113 1CVS 1 A, B FIBROBLAST GROWTH FACTOR 2 9606
114 1AXM 1 A, B, C, D, E, F ACIDIC FIBROBLAST GROWTH FACTOR FOR EACH OF THE DECASACCHARIDE CHAINS IN THE ASYMMETRIC UNIT, FIVE MONOSACCHARIDE UNITS ARE DISORDERED 9606
115 2AXM 1 A, B ACIDIC FIBROBLAST GROWTH FACTOR 9606
116 1NUN 1 A Fibroblast growth factor-10 9606
117 1EVT 1 A, B PROTEIN (FIBROBLAST GROWTH FACTOR 1) THE B-TREFOIL CORE OF FIBROBLAST GROWTH FACTOR 1 (FGF1) 9606
118 1FQ9 1 A, B FIBROBLAST GROWTH FACTOR 2 THE B-TREFOIL CORE OF FIBROBLAST GROWTH FACTOR 2 (FGF2) 9606
119 1E0O 1 A, C FIBROBLAST GROWTH FACTOR 1 9606
120 1QQK 1 A, B FIBROBLAST GROWTH FACTOR 7 FGF-7BETA (SER-54) 10116 2.5.1.16 | Details
121 1RY7 1 A Heparin-binding growth factor 1 FGF1 9606
122 4J23 2 B Fibroblast growth factor 1 unp residues 21-155 9606
123 2M49 1 A, C Fibroblast growth factor 2 UNP residues 161-286 9606
124 2KI6 2 B, E Heparin-binding growth factor 1 9606
125 2KI4 1 A, D Heparin-binding growth factor 1 9606
126 2RQ9 1 A Heparin-binding growth factor 1 residues in UNP, 22-155 9606
127 2K8R 1 A Heparin-binding growth factor 1 UNP residues 23-155 9606
128 2K4A 2 B Heparin-binding growth factor 1 UNP residues 23-155 9606
129 2K43 1 A Heparin-binding growth factor 1 UNP residues 23-155 9606
130 2ERM 1 A Heparin-binding growth factor 1 9606
131 1JY0 1 A, B acidic fibroblast growth factor 9606
132 1JT3 1 A, B acidic fibroblast growth factor 9606
133 1JT4 1 A, B acidic fibroblast growth factor 9606
134 1JT5 1 A, B acidic fibroblast growth factor 9606
135 1JT7 1 A, B, C, D acidic fibroblast growth factor 9606
136 1JTC 1 A, B, C, D acidic fibroblast growth factor 9606
137 1JQZ 1 A, B acidic fibroblast growth factor 9606
138 1FMM 1 S ACIDIC FIBROBLAST GROWTH FACTOR 8316
139 1DZC 1 A FIBROBLAST GROWTH FACTOR 1 RESIDUES 25-155 9606
140 1DZD 1 A ACIDIC FIBROBLAST GROWTH FACTOR RESIDUES 27-154 9606
141 1RML 1 A ACIDIC FIBROBLAST GROWTH FACTOR RESIDUES 23 - 154 9606
142 1BLA 1 A BASIC FIBROBLAST GROWTH FACTOR 9606
143 1BLD 1 A BASIC FIBROBLAST GROWTH FACTOR 9606