Sequence Similarity Clusters for the Entities in PDB 1HKN

Entity #1 | Chains: A,B,C,D,E,F
HEPARIN-BINDING GROWTH FACTOR 1 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 31 492
95 % 57 98 143 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 0.6
PDBFlex
90 % 58 101 145
70 % 58 102 168
50 % 69 126 173
40 % 70 127 185
30 % 71 128 198

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures