Sequence Similarity Clusters for the Entities in PDB 1HKN

Entity #1 | Chains: A,B,C,D,E,F
HEPARIN-BINDING GROWTH FACTOR 1 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 31 475
95 % 57 98 141 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 0.6
PDBFlex
90 % 58 101 142
70 % 58 102 161
50 % 68 125 164
40 % 69 126 181
30 % 70 127 192

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.