Sequence Similarity Clusters for the Entities in PDB 1HKM

Entity #1 | Chains: A
CHITOTRIOSIDASE protein, length: 365 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 11166
95 % 12 16 4141 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 12 16 4189
70 % 12 16 4115
50 % 53 83 417
40 % 62 92 414
30 % 100 132 261

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures