Sequence Similarity Clusters for the Entities in PDB 1HKL

Entity #1 | Chains: L
48G7 FAB protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 42310
95 % 9 9 8102 Flexibility: Low
Max RMSD: 6.1, Avg RMSD: 3.0
PDBFlex
90 % 423 791 2
70 % 1299 2479 1
50 % 2653 5021 1
40 % 2653 5021 1
30 % 3068 5951 1
Entity #2 | Chains: H
48G7 FAB protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 42016
95 % 4 4 19113 Flexibility: Medium
Max RMSD: 5.4, Avg RMSD: 3.9
PDBFlex
90 % 4 4 18650
70 % 1288 2429 2
50 % 2654 5021 1
40 % 2654 5021 1
30 % 3069 5951 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures