Sequence Similarity Clusters for the Entities in PDB 1HKL

Entity #1 | Chains: L
48G7 FAB protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 41752
95 % 9 9 7973 Flexibility: Low
Max RMSD: 6.1, Avg RMSD: 3.0
PDBFlex
90 % 404 763 2
70 % 1267 2426 1
50 % 2588 4913 1
40 % 2588 4913 1
30 % 2957 5780 1
Entity #2 | Chains: H
48G7 FAB protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 41459
95 % 4 4 18834 Flexibility: Medium
Max RMSD: 5.4, Avg RMSD: 3.9
PDBFlex
90 % 4 4 18386
70 % 1256 2376 2
50 % 2589 4913 1
40 % 2589 4913 1
30 % 2958 5780 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures