Sequence Similarity Clusters for the Entities in PDB 1HKL

Entity #1 | Chains: L
48G7 FAB protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40551
95 % 9 9 7737 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 2.6
PDBFlex
90 % 363 701 3
70 % 1181 2287 1
50 % 2415 4633 1
40 % 2415 4633 1
30 % 2766 5461 1
Entity #2 | Chains: H
48G7 FAB protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40272
95 % 4 4 18297 Flexibility: Medium
Max RMSD: 5.4, Avg RMSD: 3.9
PDBFlex
90 % 4 4 17870
70 % 1175 2244 2
50 % 2416 4633 1
40 % 2416 4633 1
30 % 2767 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.