Sequence Similarity Clusters for the Entities in PDB 1HKD

Entity #1 | Chains: A,C
PEA LECTIN ALPHA CHAIN protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 8684
95 % 4 5 6635
90 % 9 19 1164
70 % 9 20 1152
50 % 9 20 1204
40 % 9 20 1216
30 % 9 20 1190
Entity #2 | Chains: B,D
PEA LECTIN BETA CHAIN protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 6379
95 % 4 5 6912
90 % 4 5 6878
70 % 9 20 1158
50 % 9 20 1208
40 % 9 20 1222
30 % 9 20 1196

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.