Sequence Similarity Clusters for the Entities in PDB 1HJA

Entity #1 | Chains: A
ALPHA-CHYMOTRYPSIN protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
ALPHA-CHYMOTRYPSIN protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 30 38 813
95 % 30 38 1109 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 30 38 1130
70 % 30 40 1127
50 % 30 40 1167
40 % 32 42 1133
30 % 37 50 972
Entity #3 | Chains: C
ALPHA-CHYMOTRYPSIN protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 38 814
95 % 30 38 1110
90 % 30 38 1132
70 % 30 40 1130
50 % 33 43 1098
40 % 39 52 970
30 % 39 52 946
Entity #4 | Chains: I
OVOMUCOID INHIBITOR protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 29320
95 % 33 42 1185 Flexibility: No
Max RMSD: 2.5, Avg RMSD: 0.4
PDBFlex
90 % 34 44 1090
70 % 34 44 1132
50 % 34 47 1099
40 % 34 48 1100
30 % 35 49 1053

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.