Sequence Similarity Clusters for the Entities in PDB 1HJA

Entity #1 | Chains: A
ALPHA-CHYMOTRYPSIN protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
ALPHA-CHYMOTRYPSIN protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 30 38 819
95 % 30 38 1121 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 30 38 1145
70 % 30 40 1139
50 % 30 40 1179
40 % 32 42 1145
30 % 37 50 981
Entity #3 | Chains: C
ALPHA-CHYMOTRYPSIN protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 30 38 820
95 % 30 38 1122 Flexibility: No
Max RMSD: 1.5, Avg RMSD: 0.4
PDBFlex
90 % 30 38 1147
70 % 30 40 1142
50 % 33 43 1112
40 % 39 52 978
30 % 39 52 951
Entity #4 | Chains: I
OVOMUCOID INHIBITOR protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 29862
95 % 33 42 1200 Flexibility: No
Max RMSD: 2.5, Avg RMSD: 0.4
PDBFlex
90 % 34 44 1105
70 % 34 44 1144
50 % 34 47 1113
40 % 34 48 1112
30 % 35 49 1067

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.