Sequence Similarity Clusters for the Entities in PDB 1HJA

Entity #1 | Chains: A
ALPHA-CHYMOTRYPSIN protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
ALPHA-CHYMOTRYPSIN protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 30 38 795
95 % 30 38 1092 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 30 38 1113
70 % 30 40 1105
50 % 30 40 1150
40 % 32 42 1115
30 % 37 50 955
Entity #3 | Chains: C
ALPHA-CHYMOTRYPSIN protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 38 797
95 % 30 38 1095
90 % 30 38 1117
70 % 30 40 1109
50 % 33 43 1077
40 % 39 52 952
30 % 39 52 926
Entity #4 | Chains: I
OVOMUCOID INHIBITOR protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 28916
95 % 33 42 1170 Flexibility: No
Max RMSD: 2.5, Avg RMSD: 0.4
PDBFlex
90 % 34 44 1073
70 % 34 44 1111
50 % 34 47 1078
40 % 34 48 1081
30 % 35 49 1035

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.