Sequence Similarity Clusters for the Entities in PDB 1HIW

Entity #1 | Chains: A,B,C,Q,R,S
HIV-1 MATRIX PROTEIN protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 11 3970
95 % 2 13 3628 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 2 14 3508
70 % 2 14 3445
50 % 2 14 3359
40 % 2 14 3240
30 % 2 14 2994

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures