Sequence Similarity Clusters for the Entities in PDB 1HIW

Entity #1 | Chains: A,B,C,Q,R,S
HIV-1 MATRIX PROTEIN protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 11 3535
95 % 2 13 3696 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 2 14 3462
70 % 2 14 3423
50 % 2 14 3339
40 % 4 19 2603
30 % 4 19 2460

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures