Sequence Similarity Clusters for the Entities in PDB 1HIA

Entity #1 | Chains: A,X
KALLIKREIN protein, length: 80 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 16280
95 % 2 3 15126 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 2 3 14826
70 % 2 3 13873
50 % 2 3 12269
40 % 2 3 11012
30 % 2 3 9370
Entity #2 | Chains: B,Y
KALLIKREIN protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 16281
95 % 2 3 15127 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 2 3 14827
70 % 2 3 13874
50 % 2 3 12270
40 % 2 3 11013
30 % 2 3 9371
Entity #3 | Chains: I,J
HIRUSTASIN protein, length: 48 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38250
95 % 1 1 32402 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 31040
70 % 1 1 29857
50 % 1 1 24392
40 % 1 1 21451
30 % 1 1 17897

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures