Sequence Similarity Clusters for the Entities in PDB 1HI6

Entity #1 | Chains: A
IGG2A KAPPA ANTIBODY CB41 (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 8 9819
95 % 5 8 9635 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 21 27 2172
70 % 2016 2576 1
50 % 4101 5226 1
40 % 4620 5890 1
30 % 5757 7330 1
Entity #2 | Chains: B
IGG2A KAPPA ANTIBODY CB41 (HEAVY CHAIN) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 8 9167
95 % 5 8 9108 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 5 8 9014
70 % 1982 2532 2
50 % 4102 5226 1
40 % 4621 5890 1
30 % 5758 7330 1
Entity #3 | Chains: C
PEPTIDE 5 protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures