Sequence Similarity Clusters for the Entities in PDB 1HI6

Entity #1 | Chains: A
IGG2A KAPPA ANTIBODY CB41 (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 8 10074
95 % 5 8 9904 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 21 27 2238
70 % 2054 2637 1
50 % 4189 5362 1
40 % 4722 6051 1
30 % 5875 7514 1
Entity #2 | Chains: B
IGG2A KAPPA ANTIBODY CB41 (HEAVY CHAIN) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 8 9408
95 % 5 8 9358 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 5 8 9255
70 % 2026 2600 2
50 % 4190 5362 1
40 % 4723 6051 1
30 % 5876 7514 1
Entity #3 | Chains: C
PEPTIDE 5 protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures