Sequence Similarity Clusters for the Entities in PDB 1HI6

Entity #1 | Chains: A
IGG2A KAPPA ANTIBODY CB41 (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 10390
95 % 5 8 9250 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 20 26 2116
70 % 1808 2287 1
50 % 3670 4633 1
40 % 3670 4633 1
30 % 4338 5461 1
Entity #2 | Chains: B
IGG2A KAPPA ANTIBODY CB41 (HEAVY CHAIN) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 8 9018
95 % 5 8 9253 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 5 8 9156
70 % 1774 2244 2
50 % 3671 4633 1
40 % 3671 4633 1
30 % 4339 5461 1
Entity #3 | Chains: C
PEPTIDE 5 protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.