Sequence Similarity Clusters for the Entities in PDB 1HHT

Entity #1 | Chains: D,E,F
DNA (5'-(*TP*TP*TP*CP*C)-3') dna, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: P,Q,R
P2 PROTEIN protein, length: 664 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 17 809
95 % 15 26 629
90 % 15 26 655
70 % 15 26 701
50 % 15 26 750
40 % 15 26 783
30 % 15 26 778

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.