Sequence Similarity Clusters for the Entities in PDB 1HHQ

Entity #1 | Chains: A
NUCLEOSIDE DIPHOSPHATE KINASE protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 13 1381
95 % 9 25 819 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 9 25 859
70 % 9 25 901
50 % 48 130 73
40 % 60 159 47
30 % 60 159 64

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures