Sequence Similarity Clusters for the Entities in PDB 1HHQ

Entity #1 | Chains: A
NUCLEOSIDE DIPHOSPHATE KINASE protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 13 1427
95 % 9 25 829 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 9 25 871
70 % 9 25 915
50 % 48 130 75
40 % 60 159 48
30 % 60 159 66

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures