Sequence Similarity Clusters for the Entities in PDB 1HHO

Entity #1 | Chains: A
HEMOGLOBIN A (OXY) (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 143 208 26
95 % 167 239 34 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 168 240 35
70 % 203 321 18
50 % 480 730 5
40 % 485 735 9
30 % 897 1175 8
Entity #2 | Chains: B
HEMOGLOBIN A (OXY) (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 107 158 53
95 % 174 239 33 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 177 244 31
70 % 219 335 14
50 % 481 730 5
40 % 486 735 9
30 % 898 1175 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.