Sequence Similarity Clusters for the Entities in PDB 1HHO

Entity #1 | Chains: A
HEMOGLOBIN A (OXY) (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 144 213 22
95 % 168 244 30 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 169 245 31
70 % 205 326 15
50 % 486 742 4
40 % 491 747 7
30 % 906 1190 8
Entity #2 | Chains: B
HEMOGLOBIN A (OXY) (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 108 163 50
95 % 175 244 18
90 % 178 249 19
70 % 221 340 13
50 % 487 742 4
40 % 492 747 7
30 % 907 1190 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.