Sequence Similarity Clusters for the Entities in PDB 1HHK

Entity #1 | Chains: A,D
CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-A*0201) (ALPHA CHAIN) protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 172 194 49
95 % 217 243 54
90 % 256 283 32
70 % 565 643 7
50 % 567 648 7
40 % 598 690 11
30 % 664 806 14
Entity #2 | Chains: B,E
BETA 2-MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 486 557 2
95 % 524 600 3
90 % 533 609 4
70 % 700 836 5
50 % 712 856 5
40 % 712 856 9
30 % 712 856 13
Entity #3 | Chains: C,F
NONAMERIC PEPTIDE FROM HTLV-1 TAX PROTEIN (RESIDUES 11-19) protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.