Sequence Similarity Clusters for the Entities in PDB 1HHK

Entity #1 | Chains: A,D
CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-A*0201) (ALPHA CHAIN) protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 161 183 49
95 % 206 232 55
90 % 245 272 33
70 % 552 630 7
50 % 554 635 7
40 % 585 677 11
30 % 651 793 14
Entity #2 | Chains: B,E
BETA 2-MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 473 544 2
95 % 511 587 3
90 % 520 596 4
70 % 687 823 5
50 % 699 843 5
40 % 699 843 9
30 % 699 843 12
Entity #3 | Chains: C,F
NONAMERIC PEPTIDE FROM HTLV-1 TAX PROTEIN (RESIDUES 11-19) protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.