Sequence Similarity Clusters for the Entities in PDB 1HHJ

Entity #1 | Chains: A,D
CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-A*0201) (ALPHA CHAIN) protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 182 197 52
95 % 228 246 58
90 % 267 286 36
70 % 616 668 7
50 % 618 673 7
40 % 659 723 10
30 % 743 840 15
Entity #2 | Chains: B,E
BETA 2-MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 527 579 2
95 % 567 622 3
90 % 576 631 4
70 % 769 861 5
50 % 784 883 5
40 % 784 883 9
30 % 784 883 14
Entity #3 | Chains: C,F
HIV-1 REVERSE TRANSCRIPTASE (RESIDUES 309-317) protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.