Sequence Similarity Clusters for the Entities in PDB 1HHI

Entity #1 | Chains: A,D
CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-A*0201) (ALPHA CHAIN) protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 177 194 49
95 % 223 243 54
90 % 262 283 32
70 % 588 643 7
50 % 590 648 7
40 % 623 690 11
30 % 701 806 14
Entity #2 | Chains: B,E
BETA 2-MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 501 557 2
95 % 541 600 3
90 % 550 609 4
70 % 737 836 5
50 % 750 856 5
40 % 750 856 9
30 % 750 856 13
Entity #3 | Chains: C,F
INFLUENZA A MATRIX PROTEIN M1 (RESIDUES 58-66) protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.