Sequence Similarity Clusters for the Entities in PDB 1HHH

Entity #1 | Chains: A
CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-A*0201) (ALPHA CHAIN) protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 180 183 49
95 % 229 232 55
90 % 269 272 33
70 % 622 630 7
50 % 624 635 7
40 % 664 677 11
30 % 777 793 14
Entity #2 | Chains: B
BETA 2-MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 528 544 2
95 % 570 587 3
90 % 579 596 4
70 % 804 823 5
50 % 823 843 5
40 % 823 843 9
30 % 823 843 12
Entity #3 | Chains: C
HEPATITIS B NUCLEOCAPSID PROTEIN (RESIDUES 18-27) protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.