Sequence Similarity Clusters for the Entities in PDB 1HHG

Entity #1 | Chains: A,D
CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-A*0201) (ALPHA CHAIN) protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 187 197 50
95 % 235 246 56
90 % 274 286 33
70 % 618 656 7
50 % 620 661 7
40 % 661 709 11
30 % 755 826 14
Entity #2 | Chains: B,E
BETA 2-MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 535 577 2
95 % 576 620 3
90 % 585 629 4
70 % 787 856 5
50 % 801 876 4
40 % 801 876 9
30 % 801 876 13
Entity #3 | Chains: C,F
HIV-1 GP120 ENVELOPE PROTEIN (RESIDUES 195-207) protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.