Sequence Similarity Clusters for the Entities in PDB 1HH4

Entity #1 | Chains: A,B
RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 protein, length: 192 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 7307
95 % 30 38 660 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 1.3
PDBFlex
90 % 32 40 635
70 % 60 78 327
50 % 113 137 194
40 % 114 138 208
30 % 662 793 16
Entity #2 | Chains: D,E
RHO GDP-DISSOCIATION INHIBITOR 1 protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21626
95 % 4 6 9323 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 2.0
PDBFlex
90 % 4 6 9225
70 % 4 6 8831
50 % 4 6 7994
40 % 4 6 7347
30 % 4 6 6476

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.