Sequence Similarity Clusters for the Entities in PDB 1HH4

Entity #1 | Chains: A,B
RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 protein, length: 192 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 7456
95 % 31 40 618 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 1.3
PDBFlex
90 % 33 42 617
70 % 62 82 326
50 % 118 143 193
40 % 119 144 203
30 % 683 817 16
Entity #2 | Chains: D,E
RHO GDP-DISSOCIATION INHIBITOR 1 protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 22094
95 % 4 5 9475 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 2.0
PDBFlex
90 % 4 5 9376
70 % 4 5 8973
50 % 4 5 8126
40 % 4 5 7472
30 % 4 5 6584

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures