Sequence Similarity Clusters for the Entities in PDB 1HH4

Entity #1 | Chains: A,B
RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 protein, length: 192 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 7569
95 % 31 40 620 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 1.3
PDBFlex
90 % 33 42 621
70 % 62 82 332
50 % 118 143 196
40 % 119 144 205
30 % 688 822 16
Entity #2 | Chains: D,E
RHO GDP-DISSOCIATION INHIBITOR 1 protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 22419
95 % 4 5 9616 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 2.0
PDBFlex
90 % 4 5 9516
70 % 4 5 9096
50 % 4 5 8234
40 % 4 5 7567
30 % 4 5 6664

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures