Sequence Similarity Clusters for the Entities in PDB 1HGT

Entity #1 | Chains: L
ALPHA-THROMBIN (SMALL SUBUNIT) protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 205 328 43
95 % 205 329 58
90 % 205 329 63
70 % 205 331 74
50 % 205 331 100
40 % 205 331 124
30 % 205 331 135
Entity #2 | Chains: H
ALPHA-THROMBIN (LARGE SUBUNIT) protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 184 283 53
95 % 227 367 35
90 % 229 374 36
70 % 229 398 41
50 % 229 398 75
40 % 1097 1617 4
30 % 1185 1759 6
Entity #3 | Chains: I
HIRUGEN protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.