Sequence Similarity Clusters for the Entities in PDB 1HGI

Entity #1 | Chains: A,C,E
HEMAGGLUTININ, CHAIN HA1 protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 13 1080
95 % 15 36 318
90 % 15 36 342
70 % 24 53 265
50 % 26 55 285
40 % 153 266 17
30 % 155 272 27
Entity #2 | Chains: B,D,F
HEMAGGLUTININ, CHAIN HA1 protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 17 770
95 % 24 50 233
90 % 24 50 244
70 % 56 107 89
50 % 153 264 11
40 % 157 274 15
30 % 157 274 26

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.