Sequence Similarity Clusters for the Entities in PDB 1HGH

Entity #1 | Chains: A,C,E
HEMAGGLUTININ, CHAIN HA1 protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 13 1128
95 % 18 37 324
90 % 18 37 346
70 % 27 54 268
50 % 29 56 291
40 % 166 276 18
30 % 168 282 29
Entity #2 | Chains: B,D,F
HEMAGGLUTININ, CHAIN HA1 protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 17 800
95 % 27 51 237
90 % 27 51 249
70 % 68 117 85
50 % 166 274 11
40 % 170 284 15
30 % 170 284 28

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.