Sequence Similarity Clusters for the Entities in PDB 1HGH

Entity #1 | Chains: A,C,E
HEMAGGLUTININ, CHAIN HA1 protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 13 1200
95 % 27 47 256
90 % 27 47 271
70 % 36 64 214
50 % 47 75 215
40 % 189 307 17
30 % 192 314 26
Entity #2 | Chains: B,D,F
HEMAGGLUTININ, CHAIN HA1 protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 17 834
95 % 36 61 207
90 % 36 61 217
70 % 88 139 77
50 % 189 305 11
40 % 193 315 15
30 % 193 315 27

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.