Sequence Similarity Clusters for the Entities in PDB 1HGG

Entity #1 | Chains: A,C,E
HEMAGGLUTININ, CHAIN HA1 protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 13 1080
95 % 21 36 318
90 % 21 36 342
70 % 33 53 265
50 % 35 55 285
40 % 200 266 17
30 % 205 272 27
Entity #2 | Chains: B,D,F
HEMAGGLUTININ, CHAIN HA2 protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 17 770
95 % 32 50 233
90 % 32 50 244
70 % 78 107 89
50 % 199 264 11
40 % 203 274 15
30 % 203 274 26

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.