Sequence Similarity Clusters for the Entities in PDB 1HGG

Entity #1 | Chains: A,C,E
HEMAGGLUTININ, CHAIN HA1 protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 13 1137
95 % 22 37 324
90 % 22 37 346
70 % 34 54 270
50 % 36 56 293
40 % 212 279 18
30 % 218 286 28
Entity #2 | Chains: B,D,F
HEMAGGLUTININ, CHAIN HA2 protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 17 801
95 % 33 51 239
90 % 33 51 252
70 % 90 120 85
50 % 211 277 12
40 % 215 287 17
30 % 215 287 29

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.