Sequence Similarity Clusters for the Entities in PDB 1HGE

Entity #1 | Chains: A,C,E
HEMAGGLUTININ, (G135R), HA1 CHAIN protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 12243
95 % 21 47 270
90 % 21 47 284
70 % 35 71 201
50 % 46 82 216
40 % 175 330 17
30 % 178 337 27
Entity #2 | Chains: B,D,F
HEMAGGLUTININ, (G135R), HA1 CHAIN protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 17 866
95 % 35 68 209
90 % 35 68 220
70 % 81 146 77
50 % 173 325 10
40 % 177 335 15
30 % 177 335 28

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures