Sequence Similarity Clusters for the Entities in PDB 1HGD

Entity #1 | Chains: A,C,E
HEMAGGLUTININ, CHAIN HA1 protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 10989
95 % 15 35 324
90 % 15 35 348
70 % 24 52 264
50 % 26 54 287
40 % 154 262 17
30 % 156 268 27
Entity #2 | Chains: B,D,F
HEMAGGLUTININ, CHAIN HA1 protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 17 758
95 % 24 49 233
90 % 24 49 242
70 % 57 105 95
50 % 154 260 11
40 % 158 270 16
30 % 158 270 26

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.