Sequence Similarity Clusters for the Entities in PDB 1HGC

Entity #1 | Chains: A,C
HEMOGLOBIN (OXY) (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 117 196 10
95 % 137 227 17
90 % 137 227 18
70 % 165 306 12
50 % 390 696 4
40 % 395 701 7
30 % 774 1115 7
Entity #2 | Chains: B,D
HEMOGLOBIN (DEOXY) (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 88 149 44
95 % 145 227 16
90 % 148 232 16
70 % 180 320 8
50 % 391 696 4
40 % 396 701 7
30 % 775 1115 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.