Sequence Similarity Clusters for the Entities in PDB 1HFD

Entity #1 | Chains: A
COMPLEMENT FACTOR D protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 19 1076
95 % 20 26 1068 Flexibility: Low
Max RMSD: 5.1, Avg RMSD: 1.1
PDBFlex
90 % 20 26 1091
70 % 20 26 1130
50 % 21 27 1093
40 % 1277 1703 4
30 % 1373 1853 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures