Sequence Similarity Clusters for the Entities in PDB 1HFD

Entity #1 | Chains: A
COMPLEMENT FACTOR D protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 19 1043
95 % 20 26 1045 Flexibility: Low
Max RMSD: 5.1, Avg RMSD: 1.1
PDBFlex
90 % 20 26 1066
70 % 20 26 1103
50 % 21 27 1073
40 % 1266 1685 4
30 % 1362 1834 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.