Sequence Similarity Clusters for the Entities in PDB 1HEZ

Entity #1 | Chains: A,C
KAPPA LIGHT CHAIN OF IG protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40553
95 % 84 165 69 Flexibility: Low
Max RMSD: 6.5, Avg RMSD: 2.3
PDBFlex
90 % 448 701 3
70 % 1450 2287 1
50 % 2945 4633 1
40 % 2945 4633 1
30 % 3426 5461 1
Entity #2 | Chains: B,D
HEAVY CHAIN OF IG protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39668
95 % 1 2 14237 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.0
PDBFlex
90 % 1 2 13994
70 % 4 9 4338
50 % 2946 4633 1
40 % 2946 4633 1
30 % 3427 5461 1
Entity #3 | Chains: E
PROTEIN L protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 48300
95 % 6 7 8013 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 6 7 7969
70 % 8 11 3796
50 % 8 11 3700
40 % 8 11 3561
30 % 8 11 3332

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.