Sequence Similarity Clusters for the Entities in PDB 1HEZ

Entity #1 | Chains: A,C
KAPPA LIGHT CHAIN OF IG protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39967
95 % 84 164 69 Flexibility: Low
Max RMSD: 6.1, Avg RMSD: 2.3
PDBFlex
90 % 444 693 3
70 % 1438 2264 1
50 % 2922 4587 1
40 % 2922 4587 1
30 % 3390 5394 1
Entity #2 | Chains: B,D
HEAVY CHAIN OF IG protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39096
95 % 1 2 14035 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.0
PDBFlex
90 % 1 2 13786
70 % 4 9 4293
50 % 2923 4587 1
40 % 2923 4587 1
30 % 3391 5394 1
Entity #3 | Chains: E
PROTEIN L protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 47683
95 % 6 7 7910 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 6 7 7865
70 % 8 11 3745
50 % 8 11 3656
40 % 8 11 3517
30 % 8 11 3291

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.