Sequence Similarity Clusters for the Entities in PDB 1HES

Entity #1 | Chains: A
CLATHRIN COAT ASSEMBLY PROTEIN AP50 protein, length: 285 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 11386
95 % 6 8 9501 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 6 8 9387
70 % 7 9 7819
50 % 7 9 7187
40 % 8 11 4693
30 % 9 12 4011
Entity #2 | Chains: P
P-SELECTIN PEPTIDE protein, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures