Sequence Similarity Clusters for the Entities in PDB 1HES

Entity #1 | Chains: A
CLATHRIN COAT ASSEMBLY PROTEIN AP50 protein, length: 285 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 10328
95 % 6 8 8945 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 6 8 8866
70 % 8 11 6178
50 % 8 11 5783
40 % 9 13 4003
30 % 9 13 3698
Entity #2 | Chains: P
P-SELECTIN PEPTIDE protein, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures