Sequence Similarity Clusters for the Entities in PDB 1HES

Entity #1 | Chains: A
CLATHRIN COAT ASSEMBLY PROTEIN AP50 protein, length: 285 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 36885
95 % 4 6 11813 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 4 6 11653
70 % 5 8 8362
50 % 5 8 7603
40 % 6 10 4857
30 % 6 10 4422
Entity #2 | Chains: P
P-SELECTIN PEPTIDE protein, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.