Sequence Similarity Clusters for the Entities in PDB 1HEK

Entity #1 | Chains: A,B
GAG POLYPROTEIN, CORE PROTEIN P15 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36473
95 % 1 1 31073 Flexibility: Medium
Max RMSD: 3.6, Avg RMSD: 3.6
PDBFlex
90 % 1 1 29777
70 % 1 1 26722
50 % 1 1 22880
40 % 1 1 20160
30 % 1 1 16838

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures