Sequence Similarity Clusters for the Entities in PDB 1HEK

Entity #1 | Chains: A,B
GAG POLYPROTEIN, CORE PROTEIN P15 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45855
95 % 1 1 34415 Flexibility: Medium
Max RMSD: 3.6, Avg RMSD: 3.6
PDBFlex
90 % 1 1 32879
70 % 1 1 29290
50 % 1 1 24998
40 % 1 1 21992
30 % 1 1 18619

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures