Sequence Similarity Clusters for the Entities in PDB 1HEK

Entity #1 | Chains: A,B
GAG POLYPROTEIN, CORE PROTEIN P15 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45178
95 % 1 1 33923 Flexibility: Medium
Max RMSD: 3.6, Avg RMSD: 3.6
PDBFlex
90 % 1 1 32431
70 % 1 1 28920
50 % 1 1 24683
40 % 1 1 21720
30 % 1 1 18391

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.