Sequence Similarity Clusters for the Entities in PDB 1HE8

Entity #1 | Chains: A
PHOSPHATIDYLINOSITOL 3-KINASE CATALYTIC SUBUNIT, GAMMA ISOFORM protein, length: 965 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58605
95 % 69 96 461 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.8
PDBFlex
90 % 69 96 497
70 % 69 96 536
50 % 69 96 573
40 % 69 96 614
30 % 126 186 296
Entity #2 | Chains: B
TRANSFORMING PROTEIN P21/H-RAS-1 protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 12 3143
95 % 139 155 211 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 1.5
PDBFlex
90 % 222 244 76
70 % 224 246 91
50 % 263 294 99
40 % 424 492 23
30 % 692 837 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures