Sequence Similarity Clusters for the Entities in PDB 1HE8

Entity #1 | Chains: A
PHOSPHATIDYLINOSITOL 3-KINASE CATALYTIC SUBUNIT, GAMMA ISOFORM protein, length: 965 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50796
95 % 69 95 445 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 69 95 485
70 % 69 95 518
50 % 69 95 558
40 % 69 95 593
30 % 124 181 275
Entity #2 | Chains: B
TRANSFORMING PROTEIN P21/H-RAS-1 protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 10 4158
95 % 209 231 78 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 1.5
PDBFlex
90 % 214 236 78
70 % 216 238 93
50 % 255 287 95
40 % 409 478 21
30 % 672 817 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures