Sequence Similarity Clusters for the Entities in PDB 1HE8

Entity #1 | Chains: A
PHOSPHATIDYLINOSITOL 3-KINASE CATALYTIC SUBUNIT, GAMMA ISOFORM protein, length: 965 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51449
95 % 69 95 455 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 69 95 493
70 % 69 95 529
50 % 69 95 563
40 % 69 95 597
30 % 124 181 279
Entity #2 | Chains: B
TRANSFORMING PROTEIN P21/H-RAS-1 protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 10 4233
95 % 211 233 79 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 1.5
PDBFlex
90 % 216 238 79
70 % 218 240 93
50 % 257 289 97
40 % 414 483 21
30 % 677 822 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures