Sequence Similarity Clusters for the Entities in PDB 1HE8

Entity #1 | Chains: A
PHOSPHATIDYLINOSITOL 3-KINASE CATALYTIC SUBUNIT, GAMMA ISOFORM protein, length: 965 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48106
95 % 67 93 384 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.8
PDBFlex
90 % 67 93 414
70 % 67 93 457
50 % 67 93 534
40 % 67 93 574
30 % 120 175 272
Entity #2 | Chains: B
TRANSFORMING PROTEIN P21/H-RAS-1 protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 10 3840
95 % 127 142 221 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 1.6
PDBFlex
90 % 173 192 127
70 % 173 192 145
50 % 212 238 131
40 % 363 424 27
30 % 617 750 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.