Sequence Similarity Clusters for the Entities in PDB 1HE1

Entity #1 | Chains: A,B
EXOENZYME S protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 30166
95 % 1 2 26342 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 1 2 25403
70 % 1 2 22960
50 % 1 2 19728
40 % 1 2 17418
30 % 1 2 14616
Entity #2 | Chains: C,D
RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 15 1956
95 % 10 40 682 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.3
PDBFlex
90 % 12 42 673
70 % 13 82 354
50 % 32 146 207
40 % 32 146 228
30 % 344 918 11

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5O33 1 A Ras-related C3 botulinum toxin substrate 1 9606
2 2VRW 1 A RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 RESIDUES 1-184 9606
3 1HE1 2 C, D RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 2-184 9606
4 2NZ8 1 A ras-related C3 botulinum toxin substrate 1 isoform Rac1 soluble part (residues 1-177) 9606
5 2FJU 1 A Ras-related C3 botulinum toxin substrate 1 residues 1-189 9606
6 5N6O 1 A, B Ras-related C3 botulinum toxin substrate 1 9606
7 2YIN 2 C, D RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 RESIDUES 1-177 9606
8 1I4D 2 D RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 9606
9 3BJI 2 C, D Ras-related C3 botulinum toxin substrate 1 precursor Rac1 9606
10 1I4L 2 D RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 9606
11 5FI0 2 B, D, F, H Ras-related C3 botulinum toxin substrate 1 9606
12 3SU8 1 A Ras-related C3 botulinum toxin substrate 1 UNP residues 1-177 9606
13 1FOE 2 B, D, F, H RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE RESIDUES 1 TO 177 FROM HUMAN RAC1 9606
14 6BC1 1 A, B Ras-related C3 botulinum toxin substrate 1 9606
15 3SUA 1 A, B, C Ras-related C3 botulinum toxin substrate 1 UNP residues 1-177 9606