Sequence Similarity Clusters for the Entities in PDB 1HE1

Entity #1 | Chains: A,B
EXOENZYME S protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 29535
95 % 1 2 25816 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 1 2 24909
70 % 1 2 22541
50 % 1 2 19366
40 % 1 2 17091
30 % 1 2 14352
Entity #2 | Chains: C,D
RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 15 1875
95 % 10 40 652 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.3
PDBFlex
90 % 12 42 638
70 % 13 82 348
50 % 32 146 199
40 % 32 146 217
30 % 331 899 11

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1HE1 1 A, B EXOENZYME S 96-234, GTPASE-ACTIVATING PROTEIN (GAP-DOMAIN) 287
2 1HE9 1 A EXOENZYME S 96-234 GTPASE-ACTIVATING PROTEIN (GAP-DOMAIN) 287