Sequence Similarity Clusters for the Entities in PDB 1HE1

Entity #1 | Chains: A,B
EXOENZYME S protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 30166
95 % 1 2 26342 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 1 2 25403
70 % 1 2 22960
50 % 1 2 19728
40 % 1 2 17418
30 % 1 2 14616
Entity #2 | Chains: C,D
RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 15 1956
95 % 10 40 682 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.3
PDBFlex
90 % 12 42 673
70 % 13 82 354
50 % 32 146 207
40 % 32 146 228
30 % 344 918 11

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1HE1 1 A, B EXOENZYME S 96-234, GTPASE-ACTIVATING PROTEIN (GAP-DOMAIN) 287
2 1HE9 1 A EXOENZYME S 96-234 GTPASE-ACTIVATING PROTEIN (GAP-DOMAIN) 287