Sequence Similarity Clusters for the Entities in PDB 1HE1

Entity #1 | Chains: A,B
EXOENZYME S protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 29624
95 % 1 2 24547 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 1 2 23723
70 % 1 2 21589
50 % 1 2 18675
40 % 1 2 16631
30 % 1 2 14222
Entity #2 | Chains: C,D
RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 15 1620
95 % 10 40 618 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 1.3
PDBFlex
90 % 12 42 617
70 % 13 82 326
50 % 31 143 193
40 % 32 144 203
30 % 290 817 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures