Sequence Similarity Clusters for the Entities in PDB 1HE1

Entity #1 | Chains: A,B
EXOENZYME S protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 29980
95 % 1 2 24840 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 1 2 24000
70 % 1 2 21828
50 % 1 2 18867
40 % 1 2 16798
30 % 1 2 14367
Entity #2 | Chains: C,D
RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 15 1638
95 % 10 40 620 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 1.3
PDBFlex
90 % 12 42 621
70 % 13 82 332
50 % 31 143 196
40 % 32 144 205
30 % 293 822 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures