Sequence Similarity Clusters for the Entities in PDB 1HE1

Entity #1 | Chains: A,B
EXOENZYME S protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28674
95 % 1 2 25065 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 1 2 24209
70 % 1 2 21975
50 % 1 2 18885
40 % 1 2 16672
30 % 1 2 13979
Entity #2 | Chains: C,D
RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 15 1814
95 % 10 40 629 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.3
PDBFlex
90 % 12 42 623
70 % 13 82 336
50 % 32 145 194
40 % 32 145 211
30 % 299 837 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures