Sequence Similarity Clusters for the Entities in PDB 1HE1

Entity #1 | Chains: A,B
EXOENZYME S protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28767
95 % 1 2 23883 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 1 2 23106
70 % 1 2 21054
50 % 1 2 18233
40 % 1 2 16252
30 % 1 2 13900
Entity #2 | Chains: C,D
RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 13 1939
95 % 10 38 651 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 1.3
PDBFlex
90 % 12 40 626
70 % 13 78 319
50 % 30 137 189
40 % 31 138 205
30 % 272 775 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.