Sequence Similarity Clusters for the Entities in PDB 1HDF

Entity #1 | Chains: A,B
SPHERULIN 3A protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47207
95 % 1 2 24583 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 2 23774
70 % 1 2 21616
50 % 1 2 18697
40 % 1 2 16655
30 % 1 2 14260

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures