Sequence Similarity Clusters for the Entities in PDB 1HDF

Entity #1 | Chains: A,B
SPHERULIN 3A protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47890
95 % 1 2 24925 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 2 24093
70 % 1 2 21896
50 % 1 2 18937
40 % 1 2 16857
30 % 1 2 14427

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures