Sequence Similarity Clusters for the Entities in PDB 1HD7

Entity #1 | Chains: A
DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE protein, length: 318 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 12 1409
95 % 10 20 1246 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.8
PDBFlex
90 % 10 20 1274
70 % 10 21 1199
50 % 11 22 1220
40 % 21 47 641
30 % 25 52 596

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.