Sequence Similarity Clusters for the Entities in PDB 1HD3

Entity #1 | Chains: A
SPECTRIN ALPHA CHAIN protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 73574
95 % 24 33 1699 Flexibility: No
Max RMSD: 1.5, Avg RMSD: 0.4
PDBFlex
90 % 26 39 1425
70 % 27 43 1204
50 % 27 43 1262
40 % 118 286 123
30 % 382 1044 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures