Sequence Similarity Clusters for the Entities in PDB 1HCX

Entity #1 | Chains: A,B
MAJOR AUTOLYSIN protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 6790
95 % 2 3 7371 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.1
PDBFlex
90 % 2 3 7330
70 % 2 3 7134
50 % 2 3 6581
40 % 2 3 6134
30 % 2 3 5488

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures