Sequence Similarity Clusters for the Entities in PDB 1HCU

Entity #1 | Chains: A,B,C,D
ALPHA-1,2-MANNOSIDASE protein, length: 503 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 18661
95 % 1 1 17199 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 16794
70 % 1 1 15587
50 % 6 6 4859
40 % 6 6 4579
30 % 20 21 1979

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2RI9 1 A, B Mannosyl-oligosaccharide alpha-1,2-mannosidase 5077 3.2.1.113 | Details
2 1KKT 1 A, B Mannosyl-oligosaccharide alpha-1,2-mannosidase 5077 3.2.1.113 | Details
3 2RI8 1 A, B Mannosyl-oligosaccharide alpha-1,2-mannosidase 5077 3.2.1.113 | Details
4 1KRF 1 A, B Mannosyl-oligosaccharide alpha-1,2-mannosidase 5077 3.2.1.113 | Details
5 1KRE 1 A, B Mannosyl-oligosaccharide alpha-1,2-mannosidase 5077 3.2.1.113 | Details
6 1HCU 1 A, B, C, D ALPHA-1,2-MANNOSIDASE 51453 3.2.1.113 | Details