Sequence Similarity Clusters for the Entities in PDB 1HCU

Entity #1 | Chains: A,B,C,D
ALPHA-1,2-MANNOSIDASE protein, length: 503 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 17863
95 % 1 1 16467 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 16105
70 % 1 1 15027
50 % 6 6 4675
40 % 6 6 4407
30 % 20 21 1896

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures