Sequence Similarity Clusters for the Entities in PDB 1HCO

Entity #1 | Chains: A
HEMOGLOBIN (CARBONMONOXY) (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 212 214 23
95 % 243 245 19
90 % 244 246 21
70 % 324 327 15
50 % 737 744 4
40 % 742 749 8
30 % 1192 1201 8
Entity #2 | Chains: B
HEMOGLOBIN (CARBONMONOXY) (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 163 164 51
95 % 244 245 18 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 249 250 19
70 % 338 341 13
50 % 738 744 4
40 % 743 749 8
30 % 1193 1201 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures