Sequence Similarity Clusters for the Entities in PDB 1HCO

Entity #1 | Chains: A
HEMOGLOBIN (CARBONMONOXY) (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 207 209 26
95 % 238 240 34 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 239 241 35
70 % 319 322 17
50 % 727 734 5
40 % 732 739 9
30 % 1173 1182 8
Entity #2 | Chains: B
HEMOGLOBIN (CARBONMONOXY) (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 158 159 53
95 % 239 240 33 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 244 245 32
70 % 333 336 13
50 % 728 734 5
40 % 733 739 9
30 % 1174 1182 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.