Sequence Similarity Clusters for the Entities in PDB 1HCN

Entity #1 | Chains: A
HUMAN CHORIONIC GONADOTROPIN protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 9543
95 % 1 10 4119 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.2
PDBFlex
90 % 1 10 4146
70 % 1 10 4066
50 % 1 10 3935
40 % 1 10 3766
30 % 1 10 3490
Entity #2 | Chains: B
HUMAN CHORIONIC GONADOTROPIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 27902
95 % 1 3 23161
90 % 1 3 22414
70 % 1 3 20505
50 % 1 3 17793
40 % 1 3 15860
30 % 1 3 13564

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.