Sequence Similarity Clusters for the Entities in PDB 1HCM

Entity #1 | Chains: A,B
CYTOCHROME CD1 NITRITE REDUCTASE protein, length: 567 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 8 4250
95 % 13 13 2543 Flexibility: Low
Max RMSD: 6.7, Avg RMSD: 2.8
PDBFlex
90 % 13 13 2610
70 % 13 13 2601
50 % 14 23 1439
40 % 14 23 1425
30 % 14 23 1420

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1QKS 1 A, B CYTOCHROME CD1 NITRITE REDUCTASE 82367 1.7.2.1 | Details
2 1GQ1 1 A, B CYTOCHROME CD1 NITRITE REDUCTASE 82367 1.7.2.1 | Details
3 1HJ5 1 A, B Nitrite reductase 82367 1.7.2.1 | Details
4 1DY7 1 A, B NITRITE REDUCTASE 82367 1.7.2.1 | Details
5 1E2R 1 A, B NITRITE REDUCTASE 266 1.7.2.1 | Details
6 1HJ3 1 A, B Nitrite reductase 82367 1.7.2.1 | Details
7 1HJ4 1 A, B Nitrite reductase 82367 1.7.2.1 | Details
8 1AOQ 1 A, B NITRITE REDUCTASE 82367 1.7.2.1 | Details
9 1AOM 1 A, B NITRITE REDUCTASE 82367 1.7.2.1 | Details
10 1AOF 1 A, B NITRITE REDUCTASE 82367 1.7.2.1 | Details
11 1H9X 1 A, B CYTOCHROME CD1 NITRITE REDUCTASE 82367 1.7.2.1 | Details
12 1H9Y 1 A, B CYTOCHROME CD1 NITRITE REDUCTASE 82367 1.7.2.1 | Details
13 1HCM 1 A, B CYTOCHROME CD1 NITRITE REDUCTASE 82367 1.7.2.1 | Details